BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008E07LP1|AL425876
(791 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1776 1550 0.0
>3x_Contig1776
Length = 26138
Score = 1550 bits (781), Expect = 0.0
Identities = 789/791 (99%), Gaps = 1/791 (0%)
Strand = Plus / Plus
Query: 1 gatccaaaatttattcaattcactggtcaatgatttaatccaaaatcacaaaatgaagga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5067 gatccaaaatttattcaattcactggtcaatgatttaatccaaaatcacaaaatgaagga 5126
Query: 61 cgaagaattaatcactgaatttgacaagatgaaggcagagtttgatatccgattctttaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5127 cgaagaattaatcactgaatttgacaagatgaaggcagagtttgatatccgattctttaa 5186
Query: 121 ttttactgaatcatttgacaatctcaacgatgaggtgaatgaagatctatcattaataaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5187 ttttactgaatcatttgacaatctcaacgatgaggtgaatgaagatctatcattaataaa 5246
Query: 181 atctcacttaattgaaacttttcggcaagtcgactcagaatacatggcacaacttcaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5247 atctcacttaattgaaacttttcggcaagtcgactcagaatacatggcacaacttcaaaa 5306
Query: 241 gaacaaaaattccacagacaaagccttcaatgaattagaatctatgtcgacttatatctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5307 gaacaaaaattccacagacaaagccttcaatgaattagaatctatgtcgacttatatctt 5366
Query: 301 ggatcaccagaagacatccatggaacttattgacagctttttcycagatctaatagacct 360
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 5367 ggatcaccagaagacatccatggaacttattgacagctttttctcagatctaatagacct 5426
Query: 361 aacccgtgataaaaatctagtaattagcgatgagttaatgcagacacaagaagaaactat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5427 aacccgtgataaaaatctagtaattagcgatgagttaatgcagacacaagaagaaactat 5486
Query: 421 acacctcatatttcaatacaataaactagtgcatgaatctgttataccattattgactga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5487 acacctcatatttcaatacaataaactagtgcatgaatctgttataccattattgactga 5546
Query: 481 cgatcttttacctgtcgtcagaggtgtgtcaaattccattgttgaaaatttagacaacat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5547 cgatcttttacctgtcgtcagaggtgtgtcaaattccattgttgaaaatttagacaacat 5606
Query: 541 gaatgttgaacttacaagccatttggaaaatgtatcacaacaccatcgaagtaaaattta 600
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 5607 gaatgttgaacttacaagccatttggaaaatgtatcacaa-accatcgaagtaaaattta 5665
Query: 601 aggccttagaaaaggaaacagacagatctcttttaaaggcaaaagaggttgaatcaaatt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5666 aggccttagaaaaggaaacagacagatctcttttaaaggcaaaagaggttgaatcaaatt 5725
Query: 661 tgcgaaacttaaataaccttgtgagtacatccttgaaggggttacaaactattgtacggt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5726 tgcgaaacttaaataaccttgtgagtacatccttgaaggggttacaaactattgtacggt 5785
Query: 721 tattaacgtttttgttaaaacggcaggtcgttttggtagggatcctgcagatctttttaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5786 tattaacgtttttgttaaaacggcaggtcgttttggtagggatcctgcagatctttttaa 5845
Query: 781 ggaaatacatc 791
|||||||||||
Sbjct: 5846 ggaaatacatc 5856
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7310
Number of Sequences: 1807
Number of extensions: 7310
Number of successful extensions: 45
Number of sequences better than 1.0e-20: 1
length of query: 791
length of database: 10,358,551
effective HSP length: 16
effective length of query: 775
effective length of database: 10,329,639
effective search space: 8005470225
effective search space used: 8005470225
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)